Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918519.1_cds_XP_016467950.1_60644
CDS Infomation

[gene=LOC107790533] [db_xref=GeneID:107790533] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016467950.1] [location=join(26731..27120,28940..29224,29382..29699,29916..30143,30370..30467,31818..31917,31999..32454,32686..32809,33042..33049)] [gbkey=CDS]
Sequence

ATGGGTTGCGTCAGCTCCAAGCAAGCCACGTCCCATTCCCCGGTCCACGATTCATCGTCG
GTGACTGTTGTAGACAATGGCGATCATTTATTGCATATAAAGGCAGCTGGATTTGCCCCA
TTGGAGAAGATCAAAGAGGAGCCTGATAAAGAAGGGGAGGATAATTCTGTCCACCGCAGC
CGATTCTCTGGGAATTTGAGGAGAGCCTCCTCCTCCTCCAAAAAAGGGGCTAATTCTGAA
AAAAGGGCTACTTTTAGCATTAAATTTGGGAGGTTAAATGAAGGTGAACATTTGGCTGCC
GGTTGGCCAGCTTGGCTTACTGCCGTTGCTGGTGAAGCCATTGAGGGATGGGTGCCTCTT
CGATCGAACATGTTCCAGAAATTAGAAAAGATTGGACAAGGTACATATAGCAGTGTTTAC
CGAGCACGTGATATCGAAAGTGGTAAAATGGTCGCCCTAAAGAAGGTGCGATTTGACAAT
TTCCAACCGGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGAC
CATCCAAACATCATGAAGCTGGAGGGGATAATCACTTCTCGGTTATCATGTAGCATCTAC
CTTGTATTTGAGTATATGGAACATGACCTCTCTGGATTATTATCATGTCCTGACATCAAA
TTTACTGATTCACAGATCAAATGCTACATGCAGCAGCTACTGAGCGGACTAGAGCATTGC
CATTCACGAGGCATAATGCATCGGGATATTAAAGTTTCCAACATTTTGGTAAACAATGAA
GGAATTCTGAAAATAGCAGATTTTGGTCTTGCAAATTTCCTTAGTTCGAGGCACAAGCAA
CCACTGACCAGTCGTGTGGTTACATTATGGTATCGACCTCCTGAACTTCTGTTGGGATCA
ACAAATTATGGGGTCACCGTGGATTTGTGGAGTGTCGGTTGTGTTTTTGCAGAACTCTTT
TTTGGAAGGCCTCTCCTGAAAGGGAGGACCGAGGTAGAGCAACTGCACAAAATTTTCAAA
CTCTGTGGTACCCCCCCTGATGATTACTGGAAAAAGTCTAAACTTCCACTTGCAACTATG
TTTAAGCCCAAGCAACCATATGACAGTACCCTCCGAGATAGATGTAAAGAATTACCAAAA
ACTGCTGTGAACCTTATTGAAACACTTCTTTCAATAGATCCTTATAAACGTGGAACTGCT
TCATCTGCTCTCAATTCTGAGTATTTCAATACAAAGCCTTATGCTTGTGACCCGTCAAGC
CTGCCTAAGTACCCACCGAACAAGGAAATTGATGCCAAGTTCCGAGAAGAAGCGCGAAGA
AAGAGAGCCAGTTCCACTGCACAAGCATCTGAAACTTCAAGAAAATCCCGGAAAGCTCTC
CAAGAACCAAGCAGTTTCTGCAAAGTGGTTCCATCAGAGGAAGTTGAGGCCAATGTTCAT
GGTTCTCGTAGAAACCACGGTGGTAGTGTTCACATTTCTAAAGGAAGACGAGCTACCGTC
TCACGGATATCAATGAAACCATTGTATGACACTGTGTCAGAAGTTTCTCAAATGACTGAT
GAATCTCAAGGGGACAGCACCATTCTTTCTGTCTCTGTGCAAATGCCAGAATCGAGTGGT
TTTGCATGGGCCAAAAGAGGAAAGCAGGATTCTGCAACGACAAGGCTATATCCACCTGCC
AATTCAACAAGTCAAAAGTTAAGTACCGTAGATCCTTCTGGTGTACTGCACGCTGAGGAT
ACCTGGGACTCAAACATGCAGGATAATTATGAGCTTTTAAGTAGGGCCCACACTGTCAAA
CATTCTATCCATAGGCAACATGGTCATCATGAACGATCAGATTCGTTTGACTCGTCTGAT
CAGGAACCGTCAGTGGATTACAATGGCCAACAAGGTAGGGTTGCGTACTCGGGGCCCTTG
TTATATCAGTCCCAGAAGTTTGATACCAAGCAGGATAGTCAATCTCGAAAAGCCGGTCAT
AGGTCCCGGTTTTATAGAGATTTATAA

Peptide Sequence

PEP ID

XP_016467950.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVSSKQATSHSPVHDSSSVTVVDNGDHLLHIKAAGFAPLEKIKEEPDKEGEDNSVHRS
RFSGNLRRASSSSKKGANSEKRATFSIKFGRLNEGEHLAAGWPAWLTAVAGEAIEGWVPL
RSNMFQKLEKIGQGTYSSVYRARDIESGKMVALKKVRFDNFQPDSVRFMAREIAILRKLD
HPNIMKLEGIITSRLSCSIYLVFEYMEHDLSGLLSCPDIKFTDSQIKCYMQQLLSGLEHC
HSRGIMHRDIKVSNILVNNEGILKIADFGLANFLSSRHKQPLTSRVVTLWYRPPELLLGS
TNYGVTVDLWSVGCVFAELFFGRPLLKGRTEVEQLHKIFKLCGTPPDDYWKKSKLPLATM
FKPKQPYDSTLRDRCKELPKTAVNLIETLLSIDPYKRGTASSALNSEYFNTKPYACDPSS
LPKYPPNKEIDAKFREEARRKRASSTAQASETSRKSRKALQEPSSFCKVVPSEEVEANVH
GSRRNHGGSVHISKGRRATVSRISMKPLYDTVSEVSQMTDESQGDSTILSVSVQMPESSG
FAWAKRGKQDSATTRLYPPANSTSQKLSTVDPSGVLHAEDTWDSNMQDNYELLSRAHTVK
HSIHRQHGHHERSDSFDSSDQEPSVDYNGQQGRVAYSGPLLYQSQKFDTKQDSQSRKAGH
RSRFYRDL

Transcript Sequence

Gene sequence data has not been registered.